Here is a list of all documented class members with links to the class documentation for each member:

- c -

• choose() : tops::DegenerateDistribution , tops::PhasedRunLengthDistribution , tops::ProbabilisticModel , tops::DiscreteIIDModel , tops::ProbabilisticModelDecorator
• chooseFirstState() : tops::GeneralizedHiddenMarkovModel , tops::HiddenMarkovModel , tops::DecodableModel
• chooseObservation() : tops::DecodableModel , tops::GeneralizedHiddenMarkovModel , tops::HiddenMarkovModel
• choosePath() : tops::DecodableModel , tops::GeneralizedHiddenMarkovModel
• choosePosition() : tops::FactorableModel , tops::InhomogeneousFactorableModel , tops::InhomogeneousMarkovChain , tops::VariableLengthMarkovChain , tops::DiscreteIIDModel
• chooseState() : tops::DecodableModel , tops::GeneralizedHiddenMarkovModel , tops::HiddenMarkovModel
• compute() : tops::FactorableModelPrefixSumArray , tops::NullPrefixSumArray , tops::PrefixSumArray
• ContextTreeNode() : tops::ContextTreeNode
• create() : tops::TargetModelCreator , tops::SmoothedHistogramStanke , tops::SmoothedHistogramKernelDensity , tops::SmoothedHistogramBurge , tops::SimilarityBasedSequenceWeightingCreator , tops::ProbabilisticModelCreator , tops::TrainHMMBaumWelch , tops::ProbabilisticModelCreator , tops::PairHiddenMarkovModelCreator , tops::MultipleSequentialModelCreator , tops::InhomogeneousMarkovChainCreator , tops::HiddenMarkovModelCreator , tops::GeneralizedHiddenMarkovModelCreator , tops::TrainVariableLengthInhomogeneousMarkovChain , tops::BernoulliModelCreator , tops::BayesianInformationCriteria , tops::TrainPhasedMarkovChain , tops::TrainPHMMBaumWelch , tops::TrainWeightArrayModel , tops::TrainGHMMTransitionsCreator , tops::TrainVariableLengthMarkovChain , tops::TrainSimilarityBasedSequenceWeighting , tops::TrainWeightArrayModel , tops::TrainInterpolatedPhasedMarkovChain , tops::TrainVariableLengthMarkovChain , tops::TrainVariableLengthInhomogeneousMarkovChain , tops::ProbabilisticModelCreator , tops::TrainPhasedMarkovChainContextAlgorithm , tops::VariableLengthMarkovChainCreator , tops::TrainSimilarityBasedSequenceWeighting , tops::DiscreteIIDModelCreator , tops::AkaikeInformationCriteria , tops::TrainDiscreteIIDModel , tops::TrainFixedLengthMarkovChain , tops::TrainInterpolatedPhasedMarkovChain , tops::TrainInterpolatedMarkovChain , tops::TrainPhasedMarkovChain , tops::TrainVariableLengthMarkovChain , tops::TrainPhasedMarkovChainContextAlgorithm , tops::TrainDiscreteIIDModel , tops::TrainFixedLengthMarkovChain , tops::TrainInterpolatedMarkovChain , tops::TrainDiscreteIIDModel
• createContext() : tops::ContextTree
• createSymbol() : tops::Alphabet