ToPS
tops::InhomogeneousFactorableModel Member List
This is the complete list of members for tops::InhomogeneousFactorableModel, including all inherited members.
alphabet() const tops::ProbabilisticModel [inline, virtual]
tops::ProbabilisticModel::choose() const tops::ProbabilisticModel [inline, virtual]
choosePosition(const Sequence &s, int i, int t) const =0tops::InhomogeneousFactorableModel [pure virtual]
evaluate(const Sequence &s, unsigned int begin, unsigned int end) const tops::InhomogeneousFactorableModel [virtual]
evaluatePosition(const Sequence &s, int i, int t) const =0tops::InhomogeneousFactorableModel [pure virtual]
tops::ProbabilisticModel::evaluatePosition(const Sequence &s, unsigned int i) const tops::ProbabilisticModel [inline, virtual]
isPhased() const =0tops::InhomogeneousFactorableModel [pure virtual]
log_probability_of(int s) const tops::ProbabilisticModel [inline, virtual]
maximumTimeValue() const =0tops::InhomogeneousFactorableModel [pure virtual]
model_name() const tops::ProbabilisticModel [inline, virtual]
probability_of(int s, double new_value)tops::ProbabilisticModel [inline, virtual]
setAlphabet(AlphabetPtr alphabet)tops::ProbabilisticModel [inline, virtual]
size() const tops::ProbabilisticModel [inline, virtual]
str() const tops::ProbabilisticModel [inline, virtual]
trainBaumWelch(SequenceList &training_set, int maxiterations, double diff)tops::ProbabilisticModel [inline, virtual]